Isoacceptor tRNAs can be identified and differentiated through various molecular biology techniques. One common method is sequencing the tRNA genes and comparing the anticodon regions. Another approach is through mass spectrometry, which can detect the slight variations in the tRNA molecules. Additionally, bioinformatics tools are often used to analyze tRNA sequences and predict the presence of isoacceptor tRNAs based on codon usage patterns in different genomes.